PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY55106.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family HSF
Protein Properties Length: 297aa    MW: 32644.4 Da    PI: 4.7475
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY55106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.72.8e-36221132102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d+++++lisw+e+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+k+  ++         weF+++ F++g+k ll++i+
    TEY55106.1  22 FLTKTYQLVDDPSFNDLISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANDCFRRGEKALLRDIQ 109
                   9*****************************************************************99.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
    TEY55106.1 110 RRKI 113
                   *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MSGDGSAGSG GGESQRSVPT PFLTKTYQLV DDPSFNDLIS WNEDGTTFIV WRPAEFARDL  60
LPKYFKHNNF SSFVRQLNTY GFRKIVPDRW EFANDCFRRG EKALLRDIQR RKISVANTAS  120
TAAATTTALP AAVAIQISPA TSGDEQVLSS NSSPAAATPP RRQCTSTPEM MEENERLRRE  180
NSQLRQELSR LRGMCSSIYN LMSGYEPNPG EALALELMPE ARACCSAEEE EEDDEVLEEM  240
CPRLFGVSIG VKRYKRSGDR TAARGEDVKS EPSDGGAARS AIPGVELSIT VDSGYTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.15e-73HSF family protein