PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY55213.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 212aa    MW: 23973.6 Da    PI: 9.9854
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY55213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF565.2e-181050242
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                +i+n+s r+ tf kR++g++KK +ELS+LC++e + i++s+
  TEY55213.1 10 FISNDSARKATFKKRKKGLMKKVSELSTLCGIESCAIVYSP 50
                8***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MTRKKVKLAF ISNDSARKAT FKKRKKGLMK KVSELSTLCG IESCAIVYSP YESQPDVWPD  60
ARGAGRVVAQ FKRMPEMEQS KKMVNQESFI RGRIAKAAEQ LKKLRKENRE KEVTHLMYHC  120
LTGKGGLHGL GLPDLNDVAW MLDYNLKEIY KRIEAIGKDR AAPEERAQQQ QMFAEWMGNP  180
GGDQQIGGEE MIVPFNDGGN QGVSLWSNAF FS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAFISNDSARKATFKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-46M-type_MADS family protein