PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY55287.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 1110aa MW: 122653 Da PI: 6.8635

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY55287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70	3.2e-22	143	244	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++p++ ae++ ++++++ +++ +d++ +W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++++l TEY55287.1 143 FCKTLTASDTSTHGGFSVPRRAAEKIfppldftMQPPAQ--EIVARDLHDSVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI--RDEKQHL 237 99***************************96555544..8********************************************..5689999 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++r+ TEY55287.1 238 LLGIRRA 244 **997 PP
2	Auxin_resp	116.7	1.9e-38	269	352	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+v+YnPras+seFv++++k+ ka+ +++s+GmRf+m+fete+s +rr++Gt++g+sdld+vrW+nS+Wr+L+ TEY55287.1 269 AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVCsSQISLGMRFRMMFETEESGTRRYMGTITGISDLDSVRWKNSQWRNLQ 352 79****************************998669******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1110 aa Download sequence
MKTASSGAGV SPANSAAVEV EKKNINAELW QACAGPLVNL PVAGTHVVYF PQGHSEQVSL 60 SLLTCALMVA ASMKKDVDAQ IPSYPNLPSK LLCRLHSVTL HADPETDEVY AQMTLQPVPS 120 FDKDALLRSD LSMKANKPQT EFFCKTLTAS DTSTHGGFSV PRRAAEKIFP PLDFTMQPPA 180 QEIVARDLHD SVWTFRHIYR GQPKRHLLTT GWSLFVSGKR LFAGDSVLFI RDEKQHLLLG 240 IRRANRQPTN LSSSVLSSDS MHIGILAAAA HAAANNSPFT VFYNPRASPS EFVIPLAKYY 300 KAVCSSQISL GMRFRMMFET EESGTRRYMG TITGISDLDS VRWKNSQWRN LQVGWDESTA 360 GEKRNRVSIW EIEPVTAPFF ICPTPPFFRP KRPRQPGMPD DEAPDLDSIF RRTMPWLGDD 420 FGMKEPQALP GLSLAQWMNM QQSPSLANSM QPNSMQPNYM NPLSGSVLQN LTGADISRQL 480 GMPGAQIPQQ NNLQFNAQRQ TQPAQQLDQL QKLQSNTLSP LGSIMPGQPQ QLADMSQSRQ 540 NLISQTLPGS SQMLPSQNPI QAQQQSLLSH HQLQMNLSQN LPQQQQQQMF GHSQQQNPMS 600 SDHTSQQLHM PENQMQLMQK YHHQQQSMVA MQQPSHLTQL QDHQKQQLDV TPSFSKPMST 660 SQMLDASQTT SSMIPQSHVL SQQMARNNSQ AHLRFAQPPQ QPKPDQQQQQ QQPGMMSDLP 720 GHVGHTFQPS AGGGQSAVTD DVPSCSTSPS TNNCSNGVQL MMNGKNQRTA MVGDIQQKSD 780 VKPSLNVSKI AQSSVTQLNS TVLEAIPSSS NLVKDLQQKN DVKSSLNVSK SQNQGFFVSQ 840 TYLDPAGTQI DYLDSSSSAT SVISQNDLHM PPNNNSMSFN SQSMLFRDAS HDGEVRGVPR 900 NSLPFGANIE NQLGMPMIPD ALITKDMVGS GKDFATDVPS GGGMISSFDN QKAELSSSMV 960 SQSFGVPDMT FNSIDSTIND GSFMNQGAWP PPQIPRMRTY TKVYKRGAVG RSIDITRYAG 1020 YDELKQDLAR RFGIEGQLED RQRIGWKLVY VDHENDVLLV GDDPWEEFVN CVRCIKILSP 1080 QEVQQMSLDG DFGNSVLPNQ ACSSSDNGLN

Sequence ? help Back to Top

Protein Sequence Length: 1110 aa Download sequence

MKTASSGAGV SPANSAAVEV EKKNINAELW QACAGPLVNL PVAGTHVVYF PQGHSEQVSL  60
SLLTCALMVA ASMKKDVDAQ IPSYPNLPSK LLCRLHSVTL HADPETDEVY AQMTLQPVPS  120
FDKDALLRSD LSMKANKPQT EFFCKTLTAS DTSTHGGFSV PRRAAEKIFP PLDFTMQPPA  180
QEIVARDLHD SVWTFRHIYR GQPKRHLLTT GWSLFVSGKR LFAGDSVLFI RDEKQHLLLG  240
IRRANRQPTN LSSSVLSSDS MHIGILAAAA HAAANNSPFT VFYNPRASPS EFVIPLAKYY  300
KAVCSSQISL GMRFRMMFET EESGTRRYMG TITGISDLDS VRWKNSQWRN LQVGWDESTA  360
GEKRNRVSIW EIEPVTAPFF ICPTPPFFRP KRPRQPGMPD DEAPDLDSIF RRTMPWLGDD  420
FGMKEPQALP GLSLAQWMNM QQSPSLANSM QPNSMQPNYM NPLSGSVLQN LTGADISRQL  480
GMPGAQIPQQ NNLQFNAQRQ TQPAQQLDQL QKLQSNTLSP LGSIMPGQPQ QLADMSQSRQ  540
NLISQTLPGS SQMLPSQNPI QAQQQSLLSH HQLQMNLSQN LPQQQQQQMF GHSQQQNPMS  600
SDHTSQQLHM PENQMQLMQK YHHQQQSMVA MQQPSHLTQL QDHQKQQLDV TPSFSKPMST  660
SQMLDASQTT SSMIPQSHVL SQQMARNNSQ AHLRFAQPPQ QPKPDQQQQQ QQPGMMSDLP  720
GHVGHTFQPS AGGGQSAVTD DVPSCSTSPS TNNCSNGVQL MMNGKNQRTA MVGDIQQKSD  780
VKPSLNVSKI AQSSVTQLNS TVLEAIPSSS NLVKDLQQKN DVKSSLNVSK SQNQGFFVSQ  840
TYLDPAGTQI DYLDSSSSAT SVISQNDLHM PPNNNSMSFN SQSMLFRDAS HDGEVRGVPR  900
NSLPFGANIE NQLGMPMIPD ALITKDMVGS GKDFATDVPS GGGMISSFDN QKAELSSSMV  960
SQSFGVPDMT FNSIDSTIND GSFMNQGAWP PPQIPRMRTY TKVYKRGAVG RSIDITRYAG  1020
YDELKQDLAR RFGIEGQLED RQRIGWKLVY VDHENDVLLV GDDPWEEFVN CVRCIKILSP  1080
QEVQQMSLDG DFGNSVLPNQ ACSSSDNGLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein