PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY55295.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 122aa MW: 13623.8 Da PI: 8.6633

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY55295.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	128.3	3.5e-40	5	104	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C++dC++apyfp+++p++fa+vhk+FGasnv k+l++lp + r +a+++l+yeA +r++dPvyG++g++ +l++ql+ ++ +la++k+ TEY55295.1 5 RCAACKHLRRRCPSDCIFAPYFPSNNPRRFAYVHKIFGASNVGKILQDLPVSYRGEAANTLCYEAYCRIKDPVYGCAGIVDQLNEQLKVAEYQLATIKA 103 6********************************************************************************************999886 PP DUF260 100 e 100 TEY55295.1 104 A 104 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 122 aa Download sequence
MNSSRCAACK HLRRRCPSDC IFAPYFPSNN PRRFAYVHKI FGASNVGKIL QDLPVSYRGE 60 AANTLCYEAY CRIKDPVYGC AGIVDQLNEQ LKVAEYQLAT IKAAITSALQ PSYLLDQSLP 120 ML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26660.1	1e-45	LBD family protein