PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY55305.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family YABBY
Protein Properties Length: 171aa    MW: 19336.1 Da    PI: 8.8308
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY55305.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY189.61.5e-5821585170
       YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklse 103
                 + seq+ y+ CnfCn +lavsvP +sl+ vvtvrCGhC+sl +vn+a a+   + ++    s ++ ++ +  ++  ++k+     +  s+s+ ++k++ 
  TEY55305.1   2 DVSEQLRYIPCNFCNIVLAVSVPCSSLLDVVTVRCGHCSSLWTVNMAAAAF--PPMQP-PSSCHHFQASNITTTPAEYKV-----DLGSSSKWNYKIQP 92 
                 579****************************************88876653..32222.122222233333333333333.....33333333333333 PP

       YABBY 104 nedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                 + + + p++  v+rPPekrqrvPsayn+fikeeiqrika+nPdishreafs+aaknWahfP+ihfgl
  TEY55305.1  93 SIS-KKPEPRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 158
                 322.234444699****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MDVSEQLRYI PCNFCNIVLA VSVPCSSLLD VVTVRCGHCS SLWTVNMAAA AFPPMQPPSS  60
CHHFQASNIT TTPAEYKVDL GSSSKWNYKI QPSISKKPEP RIVNRPPEKR QRVPSAYNQF  120
IKEEIQRIKA NNPDISHREA FSTAAKNWAH FPHIHFGLML ETNSQPKLNE F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.11e-74YABBY family protein