PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY55407.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 239aa    MW: 26974.6 Da    PI: 8.8222
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY55407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF32.11.4e-10341240
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
                 ie++  r  t  kR++g++KK + L +LCd+ +++i  
  TEY55407.1  3 MIEEEKSRILTMKKRKKGLIKKLHQLTTLCDVPACMIFH 41
                69999*******************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MEMIEEEKSR ILTMKKRKKG LIKKLHQLTT LCDVPACMIF HDPTANSTSV WPEEDPDQVI  60
SLIEAYKAKK NDPSGGVREY LLSNFFDQRQ RQAEEELEKL RKNNVEGMFP TWDDCLNFMD  120
EAQLRELAAT VRGKAENHNQ QRRRERKHCG EGGGASSKAA MADREALIGA RSQSRRNGAK  180
APWMPPEKET KKTTSGENTA GKELNPRHNR MIIDHCCKGS HAGDGQKMAG PVEREKATA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11519KKRKK