PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY55445.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARR-B

Protein Properties

Length: 660aa MW: 73395.1 Da PI: 6.5852

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY55445.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.5	6.9e-29	247	300	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl TEY55445.1 247 KPRVVWSVELHQQFVTAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 300 79*****************.******************************8 PP
2	Myb_DNA-binding	41.6	2.9e-13	249	299	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ TEY55445.1 249 RVVWSVELHQQFVTAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 299 678***********************************************7 PP
3	Response_reg	45.2	5.1e-16	34	98	1	64
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellke 64 vl+vdD+p+ +++l+++l+k y ev+++ +e al+ l++++ +D+++ D+ mp+mdG++ll+ TEY55445.1 34 VLVVDDDPTCLRILEEMLKKCFY-EVTTCNRAEVALNFLRDHKngCDIVISDVHMPDMDGFKLLEC 98 89*******************.***********999999***************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MDLGVKSAPY TSSNASWKSA ADAVPGQFPA GLKVLVVDDD PTCLRILEEM LKKCFYEVTT 60 CNRAEVALNF LRDHKNGCDI VISDVHMPDM DGFKLLECVG LEMDLPVISE CANLSATFLL 120 SMCFVSWFVI SGFDFWLVFL VMSMDDSKHV VMKGVTHGAC DYLIKPVRIE ALKNIWQHVV 180 RKKQHELKDK DLEYSGSVEE GERQLKTYED TDCSHSANEG NWKNSKKRKD EDEDELEDRD 240 DTSALKKPRV VWSVELHQQF VTAVNQLGID KAVPKKILEL MNVPGLTREN VASHLQKYRL 300 YLRRLSGVSQ HHNGLGSPFM GPTDAQFGQM SSLNSVDLQA LATSGHIPPH SLASIQAAAL 360 GRATSKSPMP LPLVDQRNVF NFENPKLRFP EGQNESSSKH VNLLHGILTN MDSKQLTSLH 420 QSALGNMNMH MHSQTSQSSS LMMQMAQLRP QSRPQNLNDI NGSRNGIEVI SRPQYTSHPK 480 PSTSTDSSSQ GMEFSGNNTF LLPSNSGMSG AEMKGSRAFL PNYDVLNNLN QSRNQEWRMQ 540 NAGLSFALPQ HSSIQRGLDV SSSLGESRIL SVNKATLPIV EGRGNTPNVS QHLNFPAFDK 600 SLRSKAERLP GMGFQNGLLH ERFGQEDLMS ALLKQQQEGM VAPVETEFGY DGYQLDNLPV

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MDLGVKSAPY TSSNASWKSA ADAVPGQFPA GLKVLVVDDD PTCLRILEEM LKKCFYEVTT  60
CNRAEVALNF LRDHKNGCDI VISDVHMPDM DGFKLLECVG LEMDLPVISE CANLSATFLL  120
SMCFVSWFVI SGFDFWLVFL VMSMDDSKHV VMKGVTHGAC DYLIKPVRIE ALKNIWQHVV  180
RKKQHELKDK DLEYSGSVEE GERQLKTYED TDCSHSANEG NWKNSKKRKD EDEDELEDRD  240
DTSALKKPRV VWSVELHQQF VTAVNQLGID KAVPKKILEL MNVPGLTREN VASHLQKYRL  300
YLRRLSGVSQ HHNGLGSPFM GPTDAQFGQM SSLNSVDLQA LATSGHIPPH SLASIQAAAL  360
GRATSKSPMP LPLVDQRNVF NFENPKLRFP EGQNESSSKH VNLLHGILTN MDSKQLTSLH  420
QSALGNMNMH MHSQTSQSSS LMMQMAQLRP QSRPQNLNDI NGSRNGIEVI SRPQYTSHPK  480
PSTSTDSSSQ GMEFSGNNTF LLPSNSGMSG AEMKGSRAFL PNYDVLNNLN QSRNQEWRMQ  540
NAGLSFALPQ HSSIQRGLDV SSSLGESRIL SVNKATLPIV EGRGNTPNVS QHLNFPAFDK  600
SLRSKAERLP GMGFQNGLLH ERFGQEDLMS ALLKQQQEGM VAPVETEFGY DGYQLDNLPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	1e-150	ARR-B family protein