PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY55837.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 403aa MW: 45302.7 Da PI: 5.4489

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY55837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	28.5	3.2e-09	23	66	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 r C+++ k+++++C ++ +lC+ C ++ H+ H++v TEY55837.1 23 VRACDNCVTKRARWYCAADDAFLCDACDSSVHSAnplarrHDRV 66 578*****************************657888888876 PP
2	CCT	68.2	2.2e-23	348	391	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk++ TEY55837.1 348 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRE 391 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MQEPKQSMAS DTKLAHAVGG KSVRACDNCV TKRARWYCAA DDAFLCDACD SSVHSANPLA 60 RRHDRVRLKI ASSPPSKENE ISLSLCPGGD DTRPSWHEGF TKKARTPRGQ KKKKKFNGEF 120 VSNIIPQHLV PEQENCSEEE SEEQLLYRVP VFAVENYGEN NALRCAKVEM SDLEGIIPSE 180 SEFAADVESL LGKGLEDEAY EMEGLGIIFD CDDHDEASCL RIKAEDEEIG EKDRDFLQID 240 LGRETFELNF DYSSPINTCG EDEEDNKAGI REKDDSGKAL LKLDYDRVMT AWDHKRSPWT 300 SGERPELTSG DWWPDCCTLG TSWTMHAYGE MAMKSGGAGA GAGGDGGREA RVSRYREKRR 360 TRLFSKKIRY EVRKLNAEKR PRMKGRFVKR ESFAASAFPL LNK

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MQEPKQSMAS DTKLAHAVGG KSVRACDNCV TKRARWYCAA DDAFLCDACD SSVHSANPLA  60
RRHDRVRLKI ASSPPSKENE ISLSLCPGGD DTRPSWHEGF TKKARTPRGQ KKKKKFNGEF  120
VSNIIPQHLV PEQENCSEEE SEEQLLYRVP VFAVENYGEN NALRCAKVEM SDLEGIIPSE  180
SEFAADVESL LGKGLEDEAY EMEGLGIIFD CDDHDEASCL RIKAEDEEIG EKDRDFLQID  240
LGRETFELNF DYSSPINTCG EDEEDNKAGI REKDDSGKAL LKLDYDRVMT AWDHKRSPWT  300
SGERPELTSG DWWPDCCTLG TSWTMHAYGE MAMKSGGAGA GAGGDGGREA RVSRYREKRR  360
TRLFSKKIRY EVRKLNAEKR PRMKGRFVKR ESFAASAFPL LNK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	359	375	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	3e-70	CO-like family protein