PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY55838.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 231aa    MW: 25090.6 Da    PI: 5.7072
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY55838.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26092.16.7e-294104196
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                 +C++C+vlr++C++dC+l+p++     p++q++++ +++k++G++ +l+ll+a+p+ +r+d+++sl+yeA+ r+ +P++G+vg+++++++  +++++++
  TEY55838.1   4 SCNGCRVLRKGCSEDCILRPCLywlnsPQSQSNATFFLAKFYGRAGLLNLLAAAPPPTRPDIFKSLLYEACGRIINPIHGSVGLMSSGEWPRCHAAVNA 102
                 6*****************************************************************************************999998877 PP

      DUF260  95 al 96 
                 +l
  TEY55838.1 103 VL 104
                 66 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MRLSCNGCRV LRKGCSEDCI LRPCLYWLNS PQSQSNATFF LAKFYGRAGL LNLLAAAPPP  60
TRPDIFKSLL YEACGRIINP IHGSVGLMSS GEWPRCHAAV NAVLGGAQLI STLCDIRHVS  120
KGSAGTRCRR RRSASLADSA AAEYVSEAEA EAKFTITGWD DSKELVIGEE FRRGPSHDSF  180
SVETVETSLM LFDKGTVPET GLSEVELELS LGINPLLQTY LSTVIDISDS E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67100.11e-44LBD family protein