PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY55926.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 165aa MW: 19277.4 Da PI: 6.251

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY55926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.4	5.7e-09	27	45	38	56
TS-HHHHHHHHHHHHHHHH CS Homeobox 38 gLterqVkvWFqNrRakek 56 +L+ +q+ +WFqNrRa++k TEY55926.1 27 RLNMEQIAIWFQNRRARWK 45 68999*************9 PP
2	HD-ZIP_I/II	71.6	1.5e-23	26	80	36	90
HD-ZIP_I/II 36 LglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +l+ q+a+WFqnrRAR+ktkqlEkdye Lkr+++a+k+ene+L++++++L+++ TEY55926.1 26 RRLNMEQIAIWFQNRRARWKTKQLEKDYEILKRQFEAIKAENEALHTHNHKLHAQ 80 568899**********************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MAFSSDNNVG EDEFSDDGSQ MGEKKRRLNM EQIAIWFQNR RARWKTKQLE KDYEILKRQF 60 EAIKAENEAL HTHNHKLHAQ KREATESINL NKETEGSYSN RSENSSERKI ESPILGGRQL 120 FPPAASRPEM QHAVKEEGLC NMFVGMDDQP GFWPWIEQHQ FNVIN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	40	48	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	7e-50	HD-ZIP family protein