PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY55936.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family HD-ZIP
Protein Properties Length: 256aa    MW: 29123.1 Da    PI: 4.6973
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY55936.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.65e-1974127356
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 k++++t+eq++ Le+ F+ ++++  ++++eLAkk+gL+ rqV +WFqNrRa+ k
  TEY55936.1  74 KKRRLTAEQVQFLEKSFAVENKLEPDRKTELAKKIGLQPRQVAIWFQNRRARSK 127
                 56789***********************************************99 PP
2HD-ZIP_I/II126.41.2e-4073163191
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  ekkrrl++eqv++LE+sF  e+kLep+rK+ela+++glqprqva+WFqnrRAR ktk lE++y +Lk++yd+lk++ ++L++++e+Lr+e+
   TEY55936.1  73 EKKRRLTAEQVQFLEKSFAVENKLEPDRKTELAKKIGLQPRQVAIWFQNRRARSKTKVLEREYGSLKSSYDKLKSDYDSLSSDNEKLRNEI 163
                  69**************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MKMKSSTDFD DSLLSDDEIP SDSHWIANSS PKFHAMVNFE QARGERSSRS RQSDGGAENC  60
EDEFDSSLLH PPEKKRRLTA EQVQFLEKSF AVENKLEPDR KTELAKKIGL QPRQVAIWFQ  120
NRRARSKTKV LEREYGSLKS SYDKLKSDYD SLSSDNEKLR NEICLLSAKL VEKGNDGSTP  180
VDVAPCKQED ASSNSSHVFE ADQTSALEQD GEDDESLVQR LCLPKLESEY YDDHLQPNSC  240
NLGFPVQNQG TWFWQC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.11e-33HD-ZIP family protein