PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY56045.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

SBP

Protein Properties

Length: 460aa MW: 50099.6 Da PI: 8.1808

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY56045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	124.7	4e-39	185	261	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC++dls akeyhr+h+vC+ hsk+p+v v g e+rfCqqCsrfh+lsefDe+krsCrrrL++hn+rrrk+q+ TEY56045.1 185 CQVEGCNTDLSLAKEYHRKHRVCDSHSKCPKVKVGGCERRFCQQCSRFHSLSEFDEKKRSCRRRLSDHNARRRKPQQ 261 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MSPFMEMEWN AKWDWENLVA FGSKGIESPK NLQLADWTIV DDGEIHGGSF NLSAAACNGN 60 SGGGSDGSRH GSSAKSSISA STDSSCKDRM QNSILTFTTS EGSSGNLSKK IEMKGIELSG 120 TSSTPDAEAL LGLKLGKRTY FENTGGGGTA KSTSFSAMPA PATATATATT PKKTKSSAQN 180 GPIYCQVEGC NTDLSLAKEY HRKHRVCDSH SKCPKVKVGG CERRFCQQCS RFHSLSEFDE 240 KKRSCRRRLS DHNARRRKPQ QETIQFNLPR LSTPFYGGTT QQMSFMLNNS PLAHSRTTAN 300 SSWNNSKFAL AKGCSLKSEG DEGIDEQLHM PGIRLPQTIN MQSAADGLSA ANHTQPVVLN 360 PGGKGSLISN LDAAPEYRRA LSLLSSNSWD SCNQESVQLH HQLHENSSNI IQPMYHAIPE 420 GVPFSSSDFW PTGQHPTHHY IQSLGTKTPY DNDYYSNILN

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MSPFMEMEWN AKWDWENLVA FGSKGIESPK NLQLADWTIV DDGEIHGGSF NLSAAACNGN  60
SGGGSDGSRH GSSAKSSISA STDSSCKDRM QNSILTFTTS EGSSGNLSKK IEMKGIELSG  120
TSSTPDAEAL LGLKLGKRTY FENTGGGGTA KSTSFSAMPA PATATATATT PKKTKSSAQN  180
GPIYCQVEGC NTDLSLAKEY HRKHRVCDSH SKCPKVKVGG CERRFCQQCS RFHSLSEFDE  240
KKRSCRRRLS DHNARRRKPQ QETIQFNLPR LSTPFYGGTT QQMSFMLNNS PLAHSRTTAN  300
SSWNNSKFAL AKGCSLKSEG DEGIDEQLHM PGIRLPQTIN MQSAADGLSA ANHTQPVVLN  360
PGGKGSLISN LDAAPEYRRA LSLLSSNSWD SCNQESVQLH HQLHENSSNI IQPMYHAIPE  420
GVPFSSSDFW PTGQHPTHHY IQSLGTKTPY DNDYYSNILN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	241	258	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	1e-53	SBP family protein