PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY56049.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CAMTA

Protein Properties

Length: 1023aa MW: 114068 Da PI: 4.8474

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY56049.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	131.7	2.6e-41	8	89	35	116
CG-1 35 ksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhyle 116 ++gsl L+n++++++frkDG+sw+k+kd kt+ E+he+LKvg+ e+l+cyYah+e np+fqrr+yw+Le ++e+ivlvhy++ TEY56049.1 8 PCGSLYLFNKRVLKFFRKDGHSWRKRKDQKTIAEAHERLKVGNAEALNCYYAHGEGNPNFQRRSYWMLEPAYEHIVLVHYRD 89 68******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1023 aa Download sequence
MQSEDYDPCG SLYLFNKRVL KFFRKDGHSW RKRKDQKTIA EAHERLKVGN AEALNCYYAH 60 GEGNPNFQRR SYWMLEPAYE HIVLVHYRDI RVGNEQSGST SQLLSSSPST VSPSPTSFAS 120 ELPDSSFVVG ESYESYHNES SPSSVEISSS QFVSNHILNR SKARANEVCS SPGWDMDQAL 180 ERIKHQLSLN DDEVTECYKY NFEAEDSNDL DVLREYEFSS LTPNSSGDIL QDEGVQQHQK 240 PPGTEVDIWK EMMLDGSKDF PCAESPQQFG GHATFTMPAS LILEEVDSQK YRTYTPAPHA 300 YPPAGNSPLF YQDGLGISLD NNISLTVAQK QRFTIREISP EWCYTSEGTK IIIIGSFFCD 360 PSECEWACMI GDTEVPVQII QEGVLCCYAP AHLPGEVSIC ITSGNREACS EVREFEYRAK 420 SDVPSPSNPT GTEAYKNPDE LMSLVRFVQM LLSDAQEASE SGNDEDSWSQ VIDALLVGAS 480 TSSSTLDWLL QELLKEKLQL WLSSKLQNNE GKGCSLSKKE QGIIHMVAIL GFEWALQPIL 540 NCGVSVNFRD NNGWTALHWA ARYGREKMVA ALIASGASAG AVTDPNSQDH TGKTPASVAA 600 SYGHRGLAGY LSEVALTTHL TSLTLVESEL SKGSAELEAE RTVNSISSAE YEDEDSLRQT 660 LAAVRNATQA AARIQSAFRA HSFRKRQQWE SAIPIGGDEF SFLENDVQGL SAASKLAFRP 720 SRDYNLAAVS IQKKYRGWKG RKDFLSLRQK VVTIQAHVRG YQVRKNYKVC WAVGVLEKVV 780 LRWRRRGVGL RGFRPEQESI EESEDGDILK VFRKQKVDEA IDEAVSRVLS MVDSSEARQQ 840 YQRLLSKYRQ AKAKLQSADS DTASSYDESL KERKVMEDEE TSTAKLSSIN QQPLLSKLES 900 SLEEDGNATD EEEIEKQGGS SSSSKEIIKE LKNIQRQNTI THYLLTASIL VTLVWQLSEF 960 SLIFKIKQGF SNPLRSIGGA IKGLFGASEQ QTQVIPPTYL PGLKLPEWPG FDTSNEEDED 1020 DAD

Sequence ? help Back to Top

Protein Sequence Length: 1023 aa Download sequence

MQSEDYDPCG SLYLFNKRVL KFFRKDGHSW RKRKDQKTIA EAHERLKVGN AEALNCYYAH  60
GEGNPNFQRR SYWMLEPAYE HIVLVHYRDI RVGNEQSGST SQLLSSSPST VSPSPTSFAS  120
ELPDSSFVVG ESYESYHNES SPSSVEISSS QFVSNHILNR SKARANEVCS SPGWDMDQAL  180
ERIKHQLSLN DDEVTECYKY NFEAEDSNDL DVLREYEFSS LTPNSSGDIL QDEGVQQHQK  240
PPGTEVDIWK EMMLDGSKDF PCAESPQQFG GHATFTMPAS LILEEVDSQK YRTYTPAPHA  300
YPPAGNSPLF YQDGLGISLD NNISLTVAQK QRFTIREISP EWCYTSEGTK IIIIGSFFCD  360
PSECEWACMI GDTEVPVQII QEGVLCCYAP AHLPGEVSIC ITSGNREACS EVREFEYRAK  420
SDVPSPSNPT GTEAYKNPDE LMSLVRFVQM LLSDAQEASE SGNDEDSWSQ VIDALLVGAS  480
TSSSTLDWLL QELLKEKLQL WLSSKLQNNE GKGCSLSKKE QGIIHMVAIL GFEWALQPIL  540
NCGVSVNFRD NNGWTALHWA ARYGREKMVA ALIASGASAG AVTDPNSQDH TGKTPASVAA  600
SYGHRGLAGY LSEVALTTHL TSLTLVESEL SKGSAELEAE RTVNSISSAE YEDEDSLRQT  660
LAAVRNATQA AARIQSAFRA HSFRKRQQWE SAIPIGGDEF SFLENDVQGL SAASKLAFRP  720
SRDYNLAAVS IQKKYRGWKG RKDFLSLRQK VVTIQAHVRG YQVRKNYKVC WAVGVLEKVV  780
LRWRRRGVGL RGFRPEQESI EESEDGDILK VFRKQKVDEA IDEAVSRVLS MVDSSEARQQ  840
YQRLLSKYRQ AKAKLQSADS DTASSYDESL KERKVMEDEE TSTAKLSSIN QQPLLSKLES  900
SLEEDGNATD EEEIEKQGGS SSSSKEIIKE LKNIQRQNTI THYLLTASIL VTLVWQLSEF  960
SLIFKIKQGF SNPLRSIGGA IKGLFGASEQ QTQVIPPTYL PGLKLPEWPG FDTSNEEDED  1020
DAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-163	CAMTA family protein