PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY56889.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 224aa MW: 26021.8 Da PI: 6.5262

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY56889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.9	4.9e-20	57	109	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + ++++eqle Le+ F+++ +++ +++ +LAk+lgL+ rq+ vWFqNrRa++k TEY56889.1 57 KKRLSNEQLELLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWK 109 5569************************************************9 PP
2	HD-ZIP_I/II	123.1	1.3e-39	56	147	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kk+rls+eq++lLE+sF+ee kL+p+rK++la+eLglqprq+avWFqnrRAR+k kqlE+ y+aLk++yda+++++++L++ev +Lr+ lke TEY56889.1 56 KKKRLSNEQLELLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWKGKQLERLYDALKQEYDAVSRDKHKLQQEVMALRAILKE 147 9**************************************************************************************88875 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MDWNGNLRMP FVPRPPDTSN FNFLYNCTFD HFPVGVEMKQ HAMMEKNMNQ LMVDPKKKRL 60 SNEQLELLEN SFQEEIKLDP DRKMKLAKEL GLQPRQIAVW FQNRRARWKG KQLERLYDAL 120 KQEYDAVSRD KHKLQQEVMA LRAILKEQVA KKQVSTGYTD VSGEETVEST SIPSLEKQNP 180 VVVEGEGMTA GTSLHQMAEC NYMEEYNNTV MIPPYWATSM PSCP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	56	85	KKKRLSNEQLELLENSFQEEIKLDPDRKMK
2	104	112	RRARWKGKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	3e-47	HD-ZIP family protein