PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY57187.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 147aa MW: 17028.9 Da PI: 10.8345

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY57187.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	71.3	8.4e-23	9	53	7	51
HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 7 snrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ++++ fskRr+ ++KKA+EL vLCda+va+ii+ss+gk+ye+++ TEY57187.1 9 RQQEAAFSKRRACLFKKAHELAVLCDAQVAIIIISSDGKFYEFAT 53 556789*************************************86 PP
2	K-box	34.4	9.3e-13	70	139	26	97
K-box 26 keienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 ++ ++L+ R++lG+dL ++s eL +L+++L+k++ i+++K +ll++++e+++++++++ e+ + L+++ TEY57187.1 70 QKADKLKP--RKFLGKDLAQMSSHELSELKEKLNKGMMFIKDTKLQLLRDELEKSRMQKQQQLEKSQILQRQ 139 55555554..89*******************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 147 aa Download sequence
MDRAKIDRRQ QEAAFSKRRA CLFKKAHELA VLCDAQVAII IISSDGKFYE FATSRHLRKT 60 ALKDASVSKQ KADKLKPRKF LGKDLAQMSS HELSELKEKL NKGMMFIKDT KLQLLRDELE 120 KSRMQKQQQL EKSQILQRQA NPSPTLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57390.1	1e-22	MIKC_MADS family protein