PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY57321.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 276aa MW: 31467 Da PI: 4.6766

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY57321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.4	2.5e-18	39	92	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k TEY57321.1 39 KKRRLSVVQVKALEKNFEVENKLEPERKVKLAEELGLQPRQVAVWFQNRRARWK 92 45579999*********************************************9 PP
2	HD-ZIP_I/II	126.7	1e-40	38	130	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy Lk+++dalk + e+L+ e+++L ++++e TEY57321.1 38 EKKRRLSVVQVKALEKNFEVENKLEPERKVKLAEELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKANHDALKLKYESLHGENQSLLNQISE 130 69**************************************************************************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MKRLNSTDSL GGFMSNSPNS TVDVEFETML EEEGQIWEKK RRLSVVQVKA LEKNFEVENK 60 LEPERKVKLA EELGLQPRQV AVWFQNRRAR WKTKQLERDY GLLKANHDAL KLKYESLHGE 120 NQSLLNQISE LKSELNVSEG KIAVKEDASL SESKKKYDIE IQGGGAAAEL NFENCDGDAQ 180 ENEMMGAVFV DFKDRSDSDS SAIMNEDNNN RSPIASSGGI LHRSPQCFKA SVVGEFYQTQ 240 LVKIEEHNFF GEESCSTLFS DDQPPTLHWY FNDQWN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	39	68	KKRRLSVVQVKALEKNFEVENKLEPERKVK
2	87	95	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22430.1	1e-63	HD-ZIP family protein