PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY57347.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

WOX

Protein Properties

Length: 242aa MW: 26907.6 Da PI: 7.404

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY57347.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.3	3.6e-20	38	99	2	57
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L++l+++ r p+ae+++++++kl +++ ++V++WFqN++a+e++ TEY57347.1 38 STRWTPTSDQIRILKDLYYNsgVRSPTAEQIQRISAKLrqygKIEGKNVFYWFQNHKARERQ 99 58***************8789***********************************97 PP
2	Wus_type_Homeobox	115.2	3.1e-37	37	101	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++Qi+iL++ly+ sG+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ TEY57347.1 37 SSTRWTPTSDQIRILKDLYYnSGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKK 101 789*************9779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MEQQQVGGNG GNGGNGGNEE QGGGGKTTTT SLVCRQSSTR WTPTSDQIRI LKDLYYNSGV 60 RSPTAEQIQR ISAKLRQYGK IEGKNVFYWF QNHKARERQK KRFTSDHHHH HHPIYSNFPN 120 INPGNFASSS AAGLLNGYGS VAMENRFREC SITPNANVGG QNLAWFGVDP YPSPYPFLEM 180 SKSINDQTLL QTAEEEASEI ETLPLFPMHG DAKQDWHHRG EDAIAAASLE LSLNPYATGF 240 RH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	4e-46	WOX family protein