PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY57880.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 359aa MW: 38327.3 Da PI: 9.0318

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY57880.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.8	2.7e-40	77	201	4	125
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..........kaa 91 k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+i+++tgt++++a+++ ++s++ss+ + s++ TEY57880.1 77 VKKPSKDRHTKVDGRGRRIRMPALCAARVFQLTKELGHKSDGETIEWLLQQAEPSIIAATGTGTIPANFStLNVSHRSSGTSFSAPsskstplflgV-- 173 5899***************************************************************999866666666654444433232222220.. PP TCP 92 ksaakskksqksaasalnlakesrakarararer 125 ++ + ++ +a ++ +e +++ +++r r TEY57880.1 174 ----PPAFHHHLTA--AAFGHEPDENSYSKKRFR 201 ....3333333333..444444444444443333 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MLSMEKQGSN SGHREPPPSS LQLLSHHQSQ PDSAPPHGPF MGSISIQQPT NLSTAPAATN 60 SPPSSTTTNT DSKALVVKKP SKDRHTKVDG RGRRIRMPAL CAARVFQLTK ELGHKSDGET 120 IEWLLQQAEP SIIAATGTGT IPANFSTLNV SHRSSGTSFS APSSKSTPLF LGVPPAFHHH 180 LTAAAFGHEP DENSYSKKRF REDNQTGPGS PKPGDNDSSH NKPGSTTPST FVPAPAMWTM 240 APAAAAANMG NAFWMLPVNG GGVAATAAQQ EWQYRQASMQ RVGGFQFPGS GRYSPVQFGS 300 MVVQPSPPSP VQQLETNIGL LSSAYNNSSS DSRIDLGMNL EQNHHQRSNS SDENREDSQ

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MLSMEKQGSN SGHREPPPSS LQLLSHHQSQ PDSAPPHGPF MGSISIQQPT NLSTAPAATN  60
SPPSSTTTNT DSKALVVKKP SKDRHTKVDG RGRRIRMPAL CAARVFQLTK ELGHKSDGET  120
IEWLLQQAEP SIIAATGTGT IPANFSTLNV SHRSSGTSFS APSSKSTPLF LGVPPAFHHH  180
LTAAAFGHEP DENSYSKKRF REDNQTGPGS PKPGDNDSSH NKPGSTTPST FVPAPAMWTM  240
APAAAAANMG NAFWMLPVNG GGVAATAAQQ EWQYRQASMQ RVGGFQFPGS GRYSPVQFGS  300
MVVQPSPPSP VQQLETNIGL LSSAYNNSSS DSRIDLGMNL EQNHHQRSNS SDENREDSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35560.1	5e-54	TCP family protein