PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY58180.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

SBP

Protein Properties

Length: 413aa MW: 45080.4 Da PI: 8.126

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY58180.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	127.2	6.3e-40	151	228	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C vegC++dls+ak+yhr+h+vC++hskap+v++ gle+rfCqqCsrfh+ sefDe+krsCrrrL++hn+rrrk+q+ TEY58180.1 151 RCVVEGCNVDLSTAKDYHRKHRVCSIHSKAPKVVIGGLERRFCQQCSRFHSPSEFDEKKRSCRRRLSDHNARRRKPQQ 228 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MSHCLEMDWN TKWDWESYDA LGSKKLQLVD WTVIDDREID AGSFNLLAGC GNSGASGLDG 60 GRVSSAKSSI SVSDSSAKSL MANEDFSGNF KVTESEGTPE ASIGSVEPLI GLKLGKRTYF 120 ENSGAGSHAK SASGASLKKP KSVGGNLPTP RCVVEGCNVD LSTAKDYHRK HRVCSIHSKA 180 PKVVIGGLER RFCQQCSRFH SPSEFDEKKR SCRRRLSDHN ARRRKPQQDV IQYTTRLPSP 240 FYGGRQQMSF VLSNCPPVQL TKEYHPSKSS GDGASSEKMH IPGAKHPHFI NTAAKGFPAS 300 KSSVADVSNP GSKVSPYSSH LDAVPEYPRA LSLLSNNSWR PESMALNPIQ ENEAHPTQPM 360 MHGIPEGTPL SSSSSSEFWL HPPSAHQPWP ADANFQLFVT PCEETDLYSN IMN

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MSHCLEMDWN TKWDWESYDA LGSKKLQLVD WTVIDDREID AGSFNLLAGC GNSGASGLDG  60
GRVSSAKSSI SVSDSSAKSL MANEDFSGNF KVTESEGTPE ASIGSVEPLI GLKLGKRTYF  120
ENSGAGSHAK SASGASLKKP KSVGGNLPTP RCVVEGCNVD LSTAKDYHRK HRVCSIHSKA  180
PKVVIGGLER RFCQQCSRFH SPSEFDEKKR SCRRRLSDHN ARRRKPQQDV IQYTTRLPSP  240
FYGGRQQMSF VLSNCPPVQL TKEYHPSKSS GDGASSEKMH IPGAKHPHFI NTAAKGFPAS  300
KSSVADVSNP GSKVSPYSSH LDAVPEYPRA LSLLSNNSWR PESMALNPIQ ENEAHPTQPM  360
MHGIPEGTPL SSSSSSEFWL HPPSAHQPWP ADANFQLFVT PCEETDLYSN IMN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	208	225	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	6e-51	SBP family protein