PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY58211.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 430aa MW: 46966.6 Da PI: 6.0736

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY58211.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	29.1	2e-09	44	89	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+++ +++++ C +++ lC+dC H + H+++p+ TEY58211.1 44 SQICDNCAAEPASFRCSTDGLVLCQDCDWDAHGSllvaaaHDRCPV 89 579************************99955999999998885 PP
2	CCT	63.7	5.6e-22	382	425	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a++RYkeK+ktR+++K+irYesRKa+A++R+RvKGrFvk++ TEY58211.1 382 RGNAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKAQ 425 7789**************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MVSCDFCGER QAVVYCRADS AKLCLSCDHH VHCANALSKK HLRSQICDNC AAEPASFRCS 60 TDGLVLCQDC DWDAHGSLLV AAAHDRCPVD SFSGVPSAFE LAAAWGLEIE EKKPAEYEWG 120 GLLDELMVPN ASSVIYSDCG GELVKKKKRN PSCGKQKQVI LKQLIELLAD GGGGGGGGGD 180 GEDVGPGTPS GGAWRQESFC GQFEEQPQTL EEKQQELAQG RGFTSLLMMQ TPANQKEERN 240 MLWNTTTACD HSAQIWDFNL GQLRGHEESS PVELEFGGNN MYTMKSYGEL LKESSLAKRR 300 GVDVSGVNCS IAQEDNIIPF NSATDNQTPS QGPATSESNN VPASRPESGS MDIQFMSQSI 360 VMTNESAAAM SKSDIELLAK NRGNAMQRYK EKKKTRRYDK HIRYESRKAR ADTRKRVKGR 420 FVKAQEAPAG

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MVSCDFCGER QAVVYCRADS AKLCLSCDHH VHCANALSKK HLRSQICDNC AAEPASFRCS  60
TDGLVLCQDC DWDAHGSLLV AAAHDRCPVD SFSGVPSAFE LAAAWGLEIE EKKPAEYEWG  120
GLLDELMVPN ASSVIYSDCG GELVKKKKRN PSCGKQKQVI LKQLIELLAD GGGGGGGGGD  180
GEDVGPGTPS GGAWRQESFC GQFEEQPQTL EEKQQELAQG RGFTSLLMMQ TPANQKEERN  240
MLWNTTTACD HSAQIWDFNL GQLRGHEESS PVELEFGGNN MYTMKSYGEL LKESSLAKRR  300
GVDVSGVNCS IAQEDNIIPF NSATDNQTPS QGPATSESNN VPASRPESGS MDIQFMSQSI  360
VMTNESAAAM SKSDIELLAK NRGNAMQRYK EKKKTRRYDK HIRYESRKAR ADTRKRVKGR  420
FVKAQEAPAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33500.1	1e-100	CO-like family protein