PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY58587.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 214aa MW: 22887 Da PI: 8.5034

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY58587.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.0006	80	102	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H TEY58587.1 80 YQCKTCSKCFPSFQALGGHRASH 102 9***********99999998887 PP
2	zf-C2H2	11.2	0.0012	140	162	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H TEY58587.1 140 HECSICGAEFGSGQALGGHMRRH 162 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MQQEVAMVKG KRSKRPRSAS PLALTIASTS STSAVISNAS PSHSSGIALA HDEEEDMANC 60 LILLAEGRLP PQPPASAEVY QCKTCSKCFP SFQALGGHRA SHKKPNKPTS LEEKKPLSDE 120 DTNLSLQISN RPASGTPRVH ECSICGAEFG SGQALGGHMR RHRPIPGVKK ARNLLSLDLN 180 LPAPGDDQPE SKFPFAAKEQ VIVFAASPLI DCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	2e-47	C2H2 family protein