PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY58917.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 278aa    MW: 29221.1 Da    PI: 8.8719
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY58917.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.92.3e-1086111227
                 -S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                 kt+ C+ f   G Ck+Gd+C+FaHg+
  TEY58917.1  86 KTKVCNKFKTEGGCKFGDKCHFAHGE 111
                 89**********************96 PP
2zf-CCCH33.76.3e-11246271127
                 --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                 +kt+lC +f + G C +G+rC+FaHg+
  TEY58917.1 246 FKTKLCENFTK-GSCTFGERCHFAHGE 271
                 69*********.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MFCNRNGLLI KWYRKQIEAM HEVFQSTLSV SGCPFGENCH FLHYVPGGYN AVAQMMNLAP  60
APTPRTAGGP MHGQHGQNGA APGAVKTKVC NKFKTEGGCK FGDKCHFAHG EWELGKPIAP  120
SHEDHRGGGG PMPGRFGGGR MEPPPPVSFG ASATAKISVD ASLAGAVIGK GGVNSKQICR  180
QTGAKLSIRD HESDPNLRNI ELEGTFEQIQ QASAMVRELI VSIGPGSGPG KGFGGGGGPA  240
STGSNFKTKL CENFTKGSCT FGERCHFAHG EAELRKTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.13e-58C3H family protein