PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY59025.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 159aa MW: 18455.6 Da PI: 10.7061

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY59025.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.3	1.2e-29	26	76	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gk y +ss TEY59025.1 26 KRIENPTNRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPSGKAYQFSS 76 79***********************************************96 PP
2	K-box	51.3	5e-18	101	158	12	69
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + +e +++e++ L + ie L+ +h+ Ge+L+ L +keL+qLe+qL ++++iRskK TEY59025.1 101 TSMEVWRNEIEELSRTIEALEAREKHFAGENLSGLGMKELKQLERQLRVGVERIRSKK 158 66899**************999*******************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence
MCRRRLVCLH ILTKREKMGR GKVELKRIEN PTNRQVTFSK RRNGLLKKAF ELSVLCDAEV 60 ALIIFSPSGK AYQFSSHEIK RTITRYKIEL GIAKTDEQGI TSMEVWRNEI EELSRTIEAL 120 EAREKHFAGE NLSGLGMKEL KQLERQLRVG VERIRSKKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58780.1	7e-45	MIKC_MADS family protein