PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY59066.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 254aa MW: 29079.2 Da PI: 5.7642

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY59066.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	43	1.2e-13	33	89	26	81
trihelix 26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 + +++W+ v+ ++r+ g++r+p+qC+++w+nl ++kki++++++ ++e++s + + TEY59066.1 33 QVEAKWDYVACHCRRNGVSRGPIQCQKRWSNLLSDFKKIRTWDSRVpQEEDESFWDM 89 5578****************************************9855556555544 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MAAQGHQSPA DSNKTPRHPR WSRQETLVLI EDQVEAKWDY VACHCRRNGV SRGPIQCQKR 60 WSNLLSDFKK IRTWDSRVPQ EEDESFWDMR SDFRRERKLP GFFVREVYEV LDGKDFVGAA 120 YQLALVAVSP HENNVNGDGL DDEDGMVDSE EVEEEVLVTS PGKENVQAND KTYTIPSPVP 180 ISETRYKPSY TNQGTGNKNK DFRREEEFQE GAKKRKRSSS DCVKTDVDGI LIKALERNNE 240 LLSAHSKIRS QVSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	213	218	KKRKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-38	Trihelix family protein