PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY59083.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 129aa    MW: 15267.6 Da    PI: 8.0525
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY59083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF24.53.6e-081047239
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevavii 39
                 ie++  r  t  kR++ ++KK + L +LCd+  ++i 
  TEY59083.1 10 LIEEEKSRILTMKKRKKWLIKKLHQLTTLCDVPPCMIF 47
                599999**************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MGRGKLKMEL IEEEKSRILT MKKRKKWLIK KLHQLTTLCD VPPCMIFHDP TTNSTSVWPE  60
EDPDQVCSLI EAYKAKKNDS SGGVREYLLS NFFDQWQRQA EEKLEKLRKK NVEGMFPTWD  120
DRLNFMDEA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31640.15e-09M-type_MADS family protein