PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY59138.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 231aa    MW: 25096.9 Da    PI: 4.6755
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY59138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF52.94.6e-171761347
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                ienk    v+fskRr g+ KKA+ELS+LC+++v  iifs++g  +
  TEY59138.1 17 IENKDDLLVSFSKRRVGMYKKASELSTLCGVDVGAIIFSPSGIPH 61
                999999**********************************99655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MSEKKTRGRQ KIPIRLIENK DDLLVSFSKR RVGMYKKASE LSTLCGVDVG AIIFSPSGIP  60
HSFFTPDFDS VVHGRRDGNG PLTRIHEINN RLDGVVEQLE REERREKHLG GGEMGWWESP  120
LESLDAEQVK EQIEWFRTFR EQIKGRVEEL KNGGASSAAA GDGGGGVLGG ESFFAAPVSD  180
DAYGFAPAFD GGRYGSLDLF GGGMENEYFP GPSDLCGDGC GYLNGEAGPS E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-23M-type_MADS family protein