PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY59273.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 313aa MW: 35241.6 Da PI: 6.6687

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY59273.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.8	6.9e-42	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk lrrkC+++Cv+apyfp ++p+kf nvhk+FGasnv+kll++l+ ++reda++sl+yeAe r+rdP+yG+vg+i+ lqq+l+ql+++l+ +k+ TEY59273.1 6 PCAACKCLRRKCTQECVFAPYFPPDNPQKFTNVHKVFGASNVSKLLNELSASQREDAVNSLAYEAEHRLRDPIYGCVGFISLLQQRLSQLHVNLENAKK 104 7*********************************************************************************************99998 PP DUF260 100 e 100 e TEY59273.1 105 E 105 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MSSNSPCAAC KCLRRKCTQE CVFAPYFPPD NPQKFTNVHK VFGASNVSKL LNELSASQRE 60 DAVNSLAYEA EHRLRDPIYG CVGFISLLQQ RLSQLHVNLE NAKKELASYI GPSGMAPMLS 120 HPGFAQQHAL QPYHQLIPQN VPAMMGMQLV LRDQQQQQLL ILEQDQHQQQ LMIRDQAPPP 180 QQQQQPHLVA QQQYLEVARE QEMMQHHNRS NEFMRFNSEG GGGGAVTATG LNQISSGGGA 240 MQQPSLTLGS SYEASHQQFQ HPEQEHEYEQ GQLHPLHLLQ LQQLQEYIEA QQDNERRMQK 300 GKGKTDPCNG PSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	1e-63	LBD family protein