PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY59279.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

E2F/DP

Protein Properties

Length: 384aa MW: 41607.3 Da PI: 9.2066

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY59279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.1	2.6e-27	130	212	2	71
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 ++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k++i+wkg TEY59279.1 130 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfsdpnnslaspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKDIQWKG 212 689******...*999***************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MGNHSNSNSS TQEDGIKNSS TVSKGSGGLG GPTRSWGTTV SGGQSKSTSG SVGSPSSRSE 60 AAMATTVSDS AIMRMNNLDI QGDDAGSQGA AGLGFKTTSL VSIVLADGRF GGMRNRKKKR 120 GQRAVGGDKS GRGLRQFSMK VCEKVESKGR TTYNEVADEL VAEFSDPNNS LASPDQQQYD 180 EKNIRRRVYD ALNVLMAMDI ISKDKKDIQW KGLPRTSLDD IEELKTERLG VRSRIEKKAA 240 YLEELEEQYV GLQNLIQRNK QLYGSGNTPT GGVALPFILV QTRPHATVEV EISEDMQLVH 300 FDFNSTPFEL HDDNYVLKAM KFAEKSRNNG TAQNIPSDGG ESCSMVTSYR TQGPHPSGSS 360 ISSRPPNSSP LPGILKARVK HEQH

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MGNHSNSNSS TQEDGIKNSS TVSKGSGGLG GPTRSWGTTV SGGQSKSTSG SVGSPSSRSE  60
AAMATTVSDS AIMRMNNLDI QGDDAGSQGA AGLGFKTTSL VSIVLADGRF GGMRNRKKKR  120
GQRAVGGDKS GRGLRQFSMK VCEKVESKGR TTYNEVADEL VAEFSDPNNS LASPDQQQYD  180
EKNIRRRVYD ALNVLMAMDI ISKDKKDIQW KGLPRTSLDD IEELKTERLG VRSRIEKKAA  240
YLEELEEQYV GLQNLIQRNK QLYGSGNTPT GGVALPFILV QTRPHATVEV EISEDMQLVH  300
FDFNSTPFEL HDDNYVLKAM KFAEKSRNNG TAQNIPSDGG ESCSMVTSYR TQGPHPSGSS  360
ISSRPPNSSP LPGILKARVK HEQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-125	E2F/DP family protein