PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY60505.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

NF-YC

Protein Properties

Length: 200aa MW: 22202 Da PI: 4.5844

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY60505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	179	4.2e-56	31	135	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie ++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdiv TEY60505.1 31 QLQMFWSYQrqeIEGVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIV 129 89***998889********************************************************************************** PP NF-YC 97 prdelk 102 prde+k TEY60505.1 130 PRDEIK 135 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MENNPQQSGV PAAGYPSQAP YQHLLQQQQQ QLQMFWSYQR QEIEGVNDFK NHQLPLARIK 60 KIMKADEDVR MISAEAPILF AKACELFILE LTIRSWLHAE ENKRRTLQKN DIAAAITRTD 120 IFDFLVDIVP RDEIKDDSAA LVASPAGVTG VPYFYPPMGQ PVDPAVYAQP PSQAWQSVWQ 180 TAPEDGSYGS GGGASGNLDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	110	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	4e-90	NF-YC family protein