PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY61883.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 214aa    MW: 25241 Da    PI: 7.7328
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY61883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.69.3e-30959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien+snrqvt+skRrngi+KKA+E+SvLCda v+viif+++gk+++++s
  TEY61883.1  9 KRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFANSGKMHDFCS 59
                79***********************************************96 PP
2K-box72.61.1e-2471168197
       K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqR.hllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                 y+k sgk+l++ak+e+l++e++++kke++++q ++R hl+Ged+++L++keL+ Le++Le+++++ ++k++e+++++ ++  ++e+e+q+   +Lr++
  TEY61883.1  71 YHKLSGKRLWDAKHEHLDNEINRIKKENDSMQIQLRlHLKGEDISNLNYKELMVLEEALENGITTLKAKQMEFVRMMRKHNEMREEENQNLLFKLRQM 168
                 7899****************************77766**********************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MGRGKIEIKR IENSSNRQVT YSKRRNGIMK KAKEISVLCD AHVSVIIFAN SGKMHDFCSP  60
STTLVDMLDQ YHKLSGKRLW DAKHEHLDNE INRIKKENDS MQIQLRLHLK GEDISNLNYK  120
ELMVLEEALE NGITTLKAKQ MEFVRMMRKH NEMREEENQN LLFKLRQMHL DPMDDNVMEA  180
QGVYDQQVAD YEAQQQMPFA FRVQPMQPNL QERF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.12e-80MIKC_MADS family protein