PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY62146.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB_related

Protein Properties

Length: 470aa MW: 50660.6 Da PI: 4.4385

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY62146.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.1	1.1e-14	39	79	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT+ Ed +lv++vk++G g+W++ ++ gRt++++k++w++ TEY62146.1 39 KGPWTAAEDAILVEYVKKHGEGNWNA----LP-GRTDNEIKNYWNT 79 79**********************.....***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MGHSSTAESE DGVLSADSPL STDGDNFGGS SSGGIVLKKG PWTAAEDAIL VEYVKKHGEG 60 NWNALPGRTD NEIKNYWNTR IKRRQRAGLS LYPPDLCLQS LPENQQQLSS PRIYDGDKAC 120 DILQNNGYWA PNIMFDGLNN LRYAPAVPGI PGSVSMGNGF ASPHSYGFVP QTIGVSGQAQ 180 EPDEPMSDYG SGGVNEAPMF SRTRTDGCVN KSFQSFGLCY PYDTDHTKKL LSSDFNQDTP 240 FMSDVTYSAS EHFANAQKSE LPSLQYQETG LGVWDPPPES FDSLVQSPLP GPLPSHCPSP 300 GSSGLLEDLI YEAMALGRSE NQSSVLATSS NVSHGEVTDG SALRTCSTEF KGCIDRNSPS 360 GNSMGSLFNR YTRTTERSLE DDVTMHHVKS EVFDPSWILD GESKVDYSRP DAMLGSCWVE 420 QSGQSSKQRG STTDSIAALL GDTSASASTR GFTSCSWNNL PPVCQISDIP

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MGHSSTAESE DGVLSADSPL STDGDNFGGS SSGGIVLKKG PWTAAEDAIL VEYVKKHGEG  60
NWNALPGRTD NEIKNYWNTR IKRRQRAGLS LYPPDLCLQS LPENQQQLSS PRIYDGDKAC  120
DILQNNGYWA PNIMFDGLNN LRYAPAVPGI PGSVSMGNGF ASPHSYGFVP QTIGVSGQAQ  180
EPDEPMSDYG SGGVNEAPMF SRTRTDGCVN KSFQSFGLCY PYDTDHTKKL LSSDFNQDTP  240
FMSDVTYSAS EHFANAQKSE LPSLQYQETG LGVWDPPPES FDSLVQSPLP GPLPSHCPSP  300
GSSGLLEDLI YEAMALGRSE NQSSVLATSS NVSHGEVTDG SALRTCSTEF KGCIDRNSPS  360
GNSMGSLFNR YTRTTERSLE DDVTMHHVKS EVFDPSWILD GESKVDYSRP DAMLGSCWVE  420
QSGQSSKQRG STTDSIAALL GDTSASASTR GFTSCSWNNL PPVCQISDIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	3e-47	MYB family protein