PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY62174.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

SRS

Protein Properties

Length: 446aa MW: 47056.8 Da PI: 8.185

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY62174.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	209.2	1.1e-64	237	392	3	153
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkele 101 s +++CqdCGnqakkdC+h+RCRtCCksrg+dC+th kstWvpaa+rrerq ++a +s++++ +k++r +++++++s+t++s++++ ++++ TEY62174.1 237 SSSSACQDCGNQAKKDCQHRRCRTCCKSRGYDCTTHFKSTWVPAARRRERQLLATAG-----SSQSTSGTKKPRLGAASQTTTASHTSTSNTNQARSFD 330 56789******************************************97666554.....4446778999999999999999999999999999999 PP DUF702 102 tss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 t+s lP +v+++avf+cvrv++vddge+e+aYq++v+igGhvfkG+LydqG+e TEY62174.1 331 TTSshqdagmkesLPGQVRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFLYDQGVE 392 99899999999***********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MSACETRSRI EGWEHWHEKR YSSEKFSTTK AKLKETASAN FSDPTLSKSH LFSLRSFSTF 60 TYTKNPNFVL PINVATARRL QSDSGAFADW VASSSASAGD LSLGFNAEPA APAAAAGMWP 120 SAATRLPPEF FFVAPASSFH HHPNPESAIN FDPHSLNPSN AIGVGVIPLL TAVGSGGGDT 180 ADEDLFNRSR GGGGGGGGMQ LWQHHQQGQN SSAYLIKPMA LEHPNLLPSS GGGGATSSSS 240 ACQDCGNQAK KDCQHRRCRT CCKSRGYDCT THFKSTWVPA ARRRERQLLA TAGSSQSTSG 300 TKKPRLGAAS QTTTASHTST SNTNQARSFD TTSSHQDAGM KESLPGQVRA PAVFKCVRVT 360 AVDDGEDEYA YQAVVKIGGH VFKGFLYDQG VEGREGLPNL SELHLGGGNG DSSSPPVNLD 420 HHASNIYGGA SGGGFLGGSN YGNPIN

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MSACETRSRI EGWEHWHEKR YSSEKFSTTK AKLKETASAN FSDPTLSKSH LFSLRSFSTF  60
TYTKNPNFVL PINVATARRL QSDSGAFADW VASSSASAGD LSLGFNAEPA APAAAAGMWP  120
SAATRLPPEF FFVAPASSFH HHPNPESAIN FDPHSLNPSN AIGVGVIPLL TAVGSGGGDT  180
ADEDLFNRSR GGGGGGGGMQ LWQHHQQGQN SSAYLIKPMA LEHPNLLPSS GGGGATSSSS  240
ACQDCGNQAK KDCQHRRCRT CCKSRGYDCT THFKSTWVPA ARRRERQLLA TAGSSQSTSG  300
TKKPRLGAAS QTTTASHTST SNTNQARSFD TTSSHQDAGM KESLPGQVRA PAVFKCVRVT  360
AVDDGEDEYA YQAVVKIGGH VFKGFLYDQG VEGREGLPNL SELHLGGGNG DSSSPPVNLD  420
HHASNIYGGA SGGGFLGGSN YGNPIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.4	6e-72	SRS family protein