PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY62743.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 321aa    MW: 36046.5 Da    PI: 4.1794
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY62743.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF34.72.2e-111048240
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
                +ienk  r   + kR++g+ KK e L +LCd+ +++ii 
  TEY62743.1 10 FIENKKSRLLALKKRKEGLVKKVEQLTTLCDVPACMIIR 48
                8************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MGRANLKLQF IENKKSRLLA LKKRKEGLVK KVEQLTTLCD VPACMIIRDP TTNSTFIWPD  60
DSAQILRLID SYKADPGAVR AFGVSDFFNQ RQGNAEEGLV KKNAEAEYGT WDDRLDRMDE  120
SQLRELSGAV RAKAEALRSR IDFLKREEMM KEEENSDDML DLEDIFYQDE ILPIANALAA  180
NASAQLPVPD FYCPPPLNLA MMEKEKNNDN VVLDLVGFEG FVDQDVSFSI ADVMDFARAN  240
APLNLPQDYT FSVADVMDNG QLPVPFVDHN YLNYGYCSSM DGNQNVNWCA LNMDQNLNGS  300
SMDVNCSAGD DGGDLASYFW H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58890.12e-11M-type_MADS family protein