PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY62769.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 608aa MW: 68049.2 Da PI: 7.4848

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY62769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.8	2.6e-10	270	312	55	99
ETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 55 ksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l+++++r+ TEY62769.1 270 QPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNDKNQLLLGIRRA 312 6789***********************..7888889**997 PP
2	Auxin_resp	88.1	1.7e-29	337	403	18	83
Auxin_resp 18 rastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 ras+seFv++++k+++a+ ++vsvGmRf+m fete+ss rr++Gt++g+ dldpvrW+nS+Wrs+k TEY62769.1 337 RASPSEFVIPFSKYVQAVChTRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPVRWTNSHWRSVK 403 99************997689****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MGGSGIGSVG VLELSKIGFL GAEVMDKNMK LSTSGLGQQH GHEGEEEKKC LNSELWHACA 60 GPLVSLPTVG SRVVYFPQGH SEQVAATTNK EVDAHFPNYP SLPPQLICQL HNVTMHADIE 120 TDEVYAQMTL QPLTPQEQKD GYLPVELGMP SRQPTNYFCK TLTASDTSTH GGFSVPRRAA 180 EKVFPPLDLE IVVFAFILRE TYLETPSKSK LESYKLTISL ILNSRLWSMV CQSLGFNLIK 240 GASFWCAHRE KQTNDENIRS QDSDAVFACQ PKRHLLTTGW SVFVSAKRLV AGDSVLFIWN 300 DKNQLLLGIR RATRPQTVMP SSVLSSDTYL TKAFLIRASP SEFVIPFSKY VQAVCHTRVS 360 VGMRFRMLFE TEESSVRRYM GTITGIGDLD PVRWTNSHWR SVKVGWDEST AGDRQPRVSL 420 WEIEPLTTFP MYPSLFPLRL KRPWLGDGKL MEMLICRDGW CIQTWESHGL LDWLYLLHKG 480 AGWGRISECD LLPALPNEAT RLQILQEWCQ GIIDTVRDPG FECAHLHFDV RDRLLQSVKT 540 FFNALSTFFN ALKPRDCRSC KNGAKASLIQ LEIRASNMQG SSISCSRVAV VVAVVATEAE 600 AVGQLLQL

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MGGSGIGSVG VLELSKIGFL GAEVMDKNMK LSTSGLGQQH GHEGEEEKKC LNSELWHACA  60
GPLVSLPTVG SRVVYFPQGH SEQVAATTNK EVDAHFPNYP SLPPQLICQL HNVTMHADIE  120
TDEVYAQMTL QPLTPQEQKD GYLPVELGMP SRQPTNYFCK TLTASDTSTH GGFSVPRRAA  180
EKVFPPLDLE IVVFAFILRE TYLETPSKSK LESYKLTISL ILNSRLWSMV CQSLGFNLIK  240
GASFWCAHRE KQTNDENIRS QDSDAVFACQ PKRHLLTTGW SVFVSAKRLV AGDSVLFIWN  300
DKNQLLLGIR RATRPQTVMP SSVLSSDTYL TKAFLIRASP SEFVIPFSKY VQAVCHTRVS  360
VGMRFRMLFE TEESSVRRYM GTITGIGDLD PVRWTNSHWR SVKVGWDEST AGDRQPRVSL  420
WEIEPLTTFP MYPSLFPLRL KRPWLGDGKL MEMLICRDGW CIQTWESHGL LDWLYLLHKG  480
AGWGRISECD LLPALPNEAT RLQILQEWCQ GIIDTVRDPG FECAHLHFDV RDRLLQSVKT  540
FFNALSTFFN ALKPRDCRSC KNGAKASLIQ LEIRASNMQG SSISCSRVAV VVAVVATEAE  600
AVGQLLQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.2	0.0	ARF family protein