PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY63027.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 213aa    MW: 25100.8 Da    PI: 7.2743
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY63027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.69.2e-30959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien+snrqvt+skRrngi+KKA+E+SvLCda v+viif+++gk+++++s
  TEY63027.1  9 KRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFANSGKMHDFCS 59
                79***********************************************96 PP
2K-box76.85.8e-2671167197
       K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                 y+k sgk+l++ak+e+l++e++++kke++ +q ++Rhl+Ged+++L+++eL+ Le++Le+++++ ++k++e+++++ ++  ++e+e+q+   +Lr++
  TEY63027.1  71 YHKLSGKRLWDAKHEHLDNEINRIKKENDGMQIQLRHLKGEDISNLNYRELMVLEEALENGITTLKAKQMEFVRMMRKHNEMMEEENQNLLFKLRQM 167
                 7899****************************************************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MGRGKIEIKR IENSSNRQVT YSKRRNGIMK KAKEISVLCD AHVSVIIFAN SGKMHDFCSP  60
STTLVDMLDQ YHKLSGKRLW DAKHEHLDNE INRIKKENDG MQIQLRHLKG EDISNLNYRE  120
LMVLEEALEN GITTLKAKQM EFVRMMRKHN EMMEEENQNL LFKLRQMHLD PMDDNVMEAQ  180
GVYDQQVADY EAQQQMPFAF RVQPMQPNLQ ERF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.13e-78MIKC_MADS family protein