PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY63120.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 374aa    MW: 41966.3 Da    PI: 6.9323
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY63120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.53.6e-06153174426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 + C++f+r G C++Gd C  aHg
  TEY63120.1 153 SACPDFRR-GACRRGDACEHAHG 174
                 67******.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MQIHGIHDSA TPETELHLHF SLNTMMMMMI SDPPRTNPTV QIPNWDPYLD DQNPTPHIQS  60
PAIHADVSQY DVALAALQRY LPSNKEDFAA DDPEDDDFDI PVDAYSCDEF RMYEFKVKRC  120
ARARSHDWTE CPFAHPGEKA RRRDPRLHHY SGSACPDFRR GACRRGDACE HAHGVFECWL  180
HPARYRTQPC KDGTHCRRRV CFFAHMPEQL RILPYAADES PRSVTIGSSP RYSPPTSPLA  240
ASPPQSPMSQ LTESIRGMQI NNKMKLGLGM GLSMSPPSWG GGYGSPCSPS KIRPGFRSLP  300
ATPIRAVTRP GINAFDLWES SCEEEPAMER VESGRALRER IYSKLGKENS LYRVGHGDSA  360
GSVPDIGWVS ELCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.14e-97C3H family protein