PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY63971.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

YABBY

Protein Properties

Length: 116aa MW: 12793.7 Da PI: 8.2086

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY63971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	88.1	2.3e-27	2	92	2	91
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshl.deslkeelleelkveeenlksnvekees 91 + + sse+vCyvqCnfCntilav+vP + +++vvtvrCGhC++llsv++ q + ++ ++s+ e ++e + +++ + n+ ++ TEY63971.1 2 SFDMSSERVCYVQCNFCNTILAVNVPGSNMLNVVTVRCGHCANLLSVSMGGLLQSVYLQDFQkQQSMGEAAVKESVNIGSSSTYNTNRYGP 92 56789******************************************99998877766663202333333333333333333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 116 aa Download sequence
MSFDMSSERV CYVQCNFCNT ILAVNVPGSN MLNVVTVRCG HCANLLSVSM GGLLQSVYLQ 60 DFQKQQSMGE AAVKESVNIG SSSTYNTNRY GPLQTQHEVQ PKMPPIRRNV LLSFSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	1e-23	YABBY family protein