PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY64096.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 366aa MW: 40756.4 Da PI: 5.095

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY64096.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.7	2e-07	13	55	3	39
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 r C+ +++ ++ l+C+ ++ lC +C e H+ H++ TEY64096.1 13 DRLCDFCNDSKALLYCRADSAKLCFSCDREVHSTnplfekHNR 55 579****99*******************66777777776 PP
2	zf-B_box	25	4e-08	56	99	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg....Htvvpl 42 C+ +++ + ++fC + + lC++C e+H++ H+++pl TEY64096.1 56 SLLCDSCSSSPSSIFCCTESAVLCQNCDWESHNNfgsiHDRRPL 99 568***************************999**99886 PP
3	CCT	60.4	6.1e-21	322	365	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ al+RYkeK+ktR+++K++rYesRK++AesR R+KGrF+k + TEY64096.1 322 RDSALSRYKEKKKTRRYDKHVRYESRKVRAESRMRIKGRFAKTN 365 899**************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MSEAEQDTQS ETDRLCDFCN DSKALLYCRA DSAKLCFSCD REVHSTNPLF EKHNRSLLCD 60 SCSSSPSSIF CCTESAVLCQ NCDWESHNNF GSIHDRRPLE GFTGCPSVSE LLGFLGLHDL 120 GKKKLDLGGG NDDEFSDVLV WETPSVVSLN DLIVANDYDD SAPAFQATGV PSLPKNRNAL 180 CGKHKGEIFI QLQEMAKKDP NYSGSLDFEA YTESTQPEIT AKCLKASPGL ETKVEPLKVP 240 SYERSNVDWC FVGGVQDEGF PSTYFGDFAE MSHLVPDKDS DACDSTGFAN GLQEKQSCVP 300 GDSKAFQLLP TSATRELNSQ ERDSALSRYK EKKKTRRYDK HVRYESRKVR AESRMRIKGR 360 FAKTNQ

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MSEAEQDTQS ETDRLCDFCN DSKALLYCRA DSAKLCFSCD REVHSTNPLF EKHNRSLLCD  60
SCSSSPSSIF CCTESAVLCQ NCDWESHNNF GSIHDRRPLE GFTGCPSVSE LLGFLGLHDL  120
GKKKLDLGGG NDDEFSDVLV WETPSVVSLN DLIVANDYDD SAPAFQATGV PSLPKNRNAL  180
CGKHKGEIFI QLQEMAKKDP NYSGSLDFEA YTESTQPEIT AKCLKASPGL ETKVEPLKVP  240
SYERSNVDWC FVGGVQDEGF PSTYFGDFAE MSHLVPDKDS DACDSTGFAN GLQEKQSCVP  300
GDSKAFQLLP TSATRELNSQ ERDSALSRYK EKKKTRRYDK HVRYESRKVR AESRMRIKGR  360
FAKTNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	2e-76	CO-like family protein