PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY64182.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 177aa MW: 19708.5 Da PI: 5.5668

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY64182.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	136.6	9e-43	28	127	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C+++Cvlapyfp ++p kf +h++FGasn++k+l++lpee+reda+ss+vyeA+ar+rdPvyG++g i +lq+q+ l+++la +++ TEY64182.1 28 PCAACKILRRRCVDKCVLAPYFPPHDPLKFTTAHRVFGASNIIKFLQELPEEQREDAVSSMVYEAKARLRDPVYGCTGAICQLQKQVTDLQEQLAIAHA 126 7**********************************************************************************************9987 PP DUF260 100 e 100 TEY64182.1 127 D 127 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MEGSDTINTS SSSSSSFQPQ PQSVVISPCA ACKILRRRCV DKCVLAPYFP PHDPLKFTTA 60 HRVFGASNII KFLQELPEEQ REDAVSSMVY EAKARLRDPV YGCTGAICQL QKQVTDLQEQ 120 LAIAHADILN MQSQHSNLMA LIYMEMAQST NAVDHTKTSF FVEDTNNLGL LLEPLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	6e-67	LBD family protein