PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY64898.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 861aa    MW: 96033.2 Da    PI: 5.9547
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY64898.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.69.7e-23139240199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++ +++a+e+      +  ++ +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el+
  TEY64898.1 139 FCKTLTASDTSTHGGFSVLRRHADEClppldmS-RQPPTRELVAKDLHGQEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEDGELR 234
                 99*****************************63.3344569************************************************..4499999* PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                  +v+r+
  TEY64898.1 235 AGVRRA 240
                 999985 PP
2Auxin_resp93.34e-313033721483
  Auxin_resp  14 vYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 ++n r+s++eF+v+++++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk
  TEY64898.1 303 LFNVRTSPAEFIVPYDQYMDSIKKNYSIGMRFKMRFEGEEAPEQRFTGTIVGTEDADPNRWQESKWRCLK 372
                 5799****************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 861 aa     Download sequence    
MAPELMDSSE VLIKGYNDAG ASDSGRVDAE KALYTELWKA CAGPLVTVPR ENELVFYFPQ  60
GHIEQVEAST NQSSDQQMPV YNLPPKILCR VVNVQLKAEA DTDEVFAQIT LMPETDQDEN  120
VERKEPPPPP APHFRVFSFC KTLTASDTST HGGFSVLRRH ADECLPPLDM SRQPPTRELV  180
AKDLHGQEWR FRHIFRGQPR RHLLQSGWSV FVSSKRLVAG DAFIFLRGED GELRAGVRRA  240
MRQQGNVPSS VISSHSMHLG VLATAWHAIQ TNTMFTVYYK PSPFMSLLFL KQLRVSVFCL  300
VFLFNVRTSP AEFIVPYDQY MDSIKKNYSI GMRFKMRFEG EEAPEQRFTG TIVGTEDADP  360
NRWQESKWRC LKVRWDETSA IVRPERVSPW KIEQTLSPPA LNHVPVPKPK RPRSSALLSS  420
SDSSVLTREG PTKLNADPAP VNNGFPLVLQ GEESLTLRGT LSENNELGSS EKSSVWKPSL  480
EDEKIDVSAS RRYGVDNWSP LGCSESSFTD LLSGFGLKTN VSRDLSMPLG NQENSKRQTQ  540
ECNANFSLMG NIWSLMPSGL SLNLMDSSMK NHVQGTDASY LDRGGGRHGA FGDFSMISDP  600
RGDNQGSNWS MPPPVSTYLQ VGPSQPRELM PKPVFAEQHG AMKPKEGDCK LFGIPLISKF  660
SSLEPEMSNR NVLNSSGFTQ NSGHSRHFSA FELDQRSDQS KGLKVGDHGV SASDQENQFQ  720
FLHPSVPERE TIGHSGSTRS CTKVQKQGSA LGRSVDLAKF NNYDELISEL DNLFEFKGEL  780
KARNKNWLVV YTDDEDDMML VGDDPWAEFC CMVRKLLILT KEEMLSMKPE TLNSKGEVTS  840
SIAYGVDANV PSSPSLSPDD C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein