PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY65224.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GATA
Protein Properties Length: 270aa    MW: 29361.2 Da    PI: 10.3226
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY65224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.22.6e-19143176134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
  TEY65224.1 143 CSDCNTTKTPLWRSGPKGPKSLCNACGIRQRKAR 176
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MSSPFSQIIP LLSLAIFSSI QPGITSDSMI TTNYTNLAIV SRYGDQNYGY HGGSAYETNG  60
ADDSSLNLTL WKKESDELQN SSNPMRWMSS KMRVMQKMKK TDHDRAAVAK TTTTAQQPSS  120
SSVETDLRSN SSSYNNNSPI RVCSDCNTTK TPLWRSGPKG PKSLCNACGI RQRKARRAMA  180
AAANGASQEP VAKIKLQQKR KNGHSASQLK KHCKTAVTVA GSGGNGQKRI GFEDFLINLS  240
KNLAFHRVFP EDEKDAAFLL MALSSGLVNG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173214RKARRAMAAAANGASQEPVAKIKLQQKRKNGHSASQLKKHCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.11e-25GATA family protein