PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY65243.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MYB_related
Protein Properties Length: 266aa    MW: 29621.4 Da    PI: 6.9295
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY65243.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.52.4e-11556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT eE+e l  +++++G g Wk I r          R+  ++k++w+++
       TEY65243.1  5 KQKWTSEEEEALRAGIAKHGAGKWKNIQRDPEfnhllFSRSNIDLKDKWRNL 56
                     79*******************************9*9989***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MGNPKQKWTS EEEEALRAGI AKHGAGKWKN IQRDPEFNHL LFSRSNIDLK DKWRNLSVAN  60
GQGPRDKSKT PKTKANPAEA PVTPLPSCQD ASTDVVMLDS SRPLPDGNNA SKYNSMIFEA  120
LSTLQEPNGS DSGAIATYIE QRQEVPQNFK RALSSRLRRL VQQDKLEKVQ NNCYKIKSKT  180
QLDTRIPIAR PKELHQSIGY LGNTVEEAAV CAAYEIAEAE NKSFVAAEAV KEAERVSMMA  240
EDMESLLQFA TDCHDQSMRG EIVLMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.21e-57MYB_related family protein