PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY65311.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 217aa    MW: 23791.1 Da    PI: 8.5812
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY65311.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26095.17.9e-304106198
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                 +C++C+vlr++C+++C ++p++     p++q++++ +++k++G++ +++l++a p + r+ +++sl+y A+ r+ +P+yG+vg+++++++ql+++++e+
  TEY65311.1   4 SCNGCRVLRKGCSDNCSIRPCLewiksPESQANATVFLAKFYGRAGLMNLINAGPSHLRPGIFRSLLYDACGRILNPIYGSVGLMWSGSWQLCHSAVEA 102
                 6***********************************************************************************************999 PP

      DUF260  95 allk 98 
                 +l++
  TEY65311.1 103 VLRG 106
                 8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MRMSCNGCRV LRKGCSDNCS IRPCLEWIKS PESQANATVF LAKFYGRAGL MNLINAGPSH  60
LRPGIFRSLL YDACGRILNP IYGSVGLMWS GSWQLCHSAV EAVLRGAPVT RMDTDAAEAK  120
NGPPLKVYDI RHVNKDKQTD PRRVTNKRSG KRARLSEEVN GSISHESSLS HQSEPPSSTG  180
EGEIELDLTL GFEPITTPKR AGSGFSEMEL RLDCLPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.13e-86LBD family protein