PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY66129.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 167aa MW: 17969.4 Da PI: 7.3914

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY66129.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127.5	6.2e-40	10	108	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC +Cv++p+fp e++ +fanvhk+FGasnv kll++l +++r +a+ssl+yeAear+rdPv+G++g i+ lq+q+++l+ el+++++ TEY66129.1 10 PCAACKFLRRKCILGCVFSPHFPPEEALRFANVHKVFGASNVAKLLNELLPHQRAAAASSLAYEAEARVRDPVHGCTGEISFLQRQVDRLQRELDAANA 108 7*********************************************************************************************98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MASSTSYNPP CAACKFLRRK CILGCVFSPH FPPEEALRFA NVHKVFGASN VAKLLNELLP 60 HQRAAAASSL AYEAEARVRD PVHGCTGEIS FLQRQVDRLQ RELDAANAVL VWFACNDVVS 120 LEAAGRSNVG LGGGGGRFYQ IGGLPISYDV PWNDIYNCHG GGMDGSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	1e-52	LBD family protein