PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY66200.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 1102aa MW: 121643 Da PI: 6.9035

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY66200.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.6	4.9e-23	132	233	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++p++ ae++ +++++++ ++ +d++ +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F ++++++l TEY66200.1 132 FCKTLTASDTSTHGGFSVPRRAAEKIfptldfsMQPPAQG--IVARDLHETVWTFRHIFRGQPKRHLLTSGWSLFVNAKRLVAGDSVLFI--RDEKQQL 226 99****************************76666676..********************************************..5688889 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++r+ TEY66200.1 227 LLGIRRA 233 **997 PP
2	Auxin_resp	115.2	5.8e-38	258	341	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekve.kalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+v+YnPr+s+seFv++++k+ +a+++++s+GmRf+m+fet++s +rr++Gt++g+sdldpvrW+nS+Wr+L+ TEY66200.1 258 AAHAAANSSPFTVFYNPRSSPSEFVIPLAKYYrAACSSQISLGMRFRMMFETDESGTRRYMGTITGISDLDPVRWKNSQWRNLQ 341 79************************997615678*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1102 aa Download sequence
MKAANTGSGA LPPNASAAEG ENKSINAELW QACAGPLANL PAAGTHVVYF PQGHSEQVAA 60 SMRKDANAQI PSYPNLPSKL ICLLHNVTLH ADPETDEVYA QMTLQPVPSF DQDALLRSDL 120 SMKVNKPQTE FFCKTLTASD TSTHGGFSVP RRAAEKIFPT LDFSMQPPAQ GIVARDLHET 180 VWTFRHIFRG QPKRHLLTSG WSLFVNAKRL VAGDSVLFIR DEKQQLLLGI RRANRQPANL 240 SSSVLSSDSM HIGVLAAAAH AAANSSPFTV FYNPRSSPSE FVIPLAKYYR AACSSQISLG 300 MRFRMMFETD ESGTRRYMGT ITGISDLDPV RWKNSQWRNL QVGWDESTAG ERRSRVSIWE 360 IEPITAPFFI CPTPPFLRTK FPRQSGIPGK ELYNDSSDFD SLFRRSMPWP GDEFGLKDSQ 420 ALPGLSLVQW MNMQQNSSMT NPTQSNYINH LPGSVLQNFG GSDISRQLGL PMTQVPHQHN 480 LQHSAQRPTE SVQQQDQLKT STLNNIRSTI QPQQQLTDVT HSPRQSLGGQ TIPTSQVQSQ 540 NPIEAQNVLQ HQQSLLSHQL QRNLPQNPPL QQQQILAHSQ QQNPDHTSQQ QQQQHMSDNQ 600 VKLQLLQKLH QQQQSLLAQQ SGLQHSSHLT QLQDQQKQLL ETPPNLSRSM KTNQMSDSSQ 660 ASGMHSQSHG TGQQMVRSNS QFNLLRCSQL PQQPKLQQQH QQSGMLSDFS GYVGGALKPI 720 TNQLSARSNG LLTAATGGFQ AAVTDDVSSC STSLSTNNCR NAVQTVINGR NHQSTTLGDE 780 IAQSSASLLN PSGLEQMSSN GHIGKDIHQK SDAKPSMNVF KNQNHGFIGA HTFHDRAGTQ 840 IDYLDSSSSV TSVFPQNEGQ IPQNNSMTYN SQSLFFRDAS QDGEVLGDPR SNVPFGTDID 900 NQLDMPLILN PLVTKDMGGS GKDFANNLSS GEGVLSTYEN PKDAQPVHSS SMVSQPFGVP 960 DVAFNSIDSN VDDGGFVNRG SWAAPHIPRM RTYTKVYKRG AVGRSIDISH YSGYDELKQD 1020 LARRFGIEGQ LEDRQRIGWK LVYVDHENDV LLVGDDPWEE FVSCVRCIKI LSPQEVQQMS 1080 LDGDFGDNVL PNQVCSSSDN VV

Sequence ? help Back to Top

Protein Sequence Length: 1102 aa Download sequence

MKAANTGSGA LPPNASAAEG ENKSINAELW QACAGPLANL PAAGTHVVYF PQGHSEQVAA  60
SMRKDANAQI PSYPNLPSKL ICLLHNVTLH ADPETDEVYA QMTLQPVPSF DQDALLRSDL  120
SMKVNKPQTE FFCKTLTASD TSTHGGFSVP RRAAEKIFPT LDFSMQPPAQ GIVARDLHET  180
VWTFRHIFRG QPKRHLLTSG WSLFVNAKRL VAGDSVLFIR DEKQQLLLGI RRANRQPANL  240
SSSVLSSDSM HIGVLAAAAH AAANSSPFTV FYNPRSSPSE FVIPLAKYYR AACSSQISLG  300
MRFRMMFETD ESGTRRYMGT ITGISDLDPV RWKNSQWRNL QVGWDESTAG ERRSRVSIWE  360
IEPITAPFFI CPTPPFLRTK FPRQSGIPGK ELYNDSSDFD SLFRRSMPWP GDEFGLKDSQ  420
ALPGLSLVQW MNMQQNSSMT NPTQSNYINH LPGSVLQNFG GSDISRQLGL PMTQVPHQHN  480
LQHSAQRPTE SVQQQDQLKT STLNNIRSTI QPQQQLTDVT HSPRQSLGGQ TIPTSQVQSQ  540
NPIEAQNVLQ HQQSLLSHQL QRNLPQNPPL QQQQILAHSQ QQNPDHTSQQ QQQQHMSDNQ  600
VKLQLLQKLH QQQQSLLAQQ SGLQHSSHLT QLQDQQKQLL ETPPNLSRSM KTNQMSDSSQ  660
ASGMHSQSHG TGQQMVRSNS QFNLLRCSQL PQQPKLQQQH QQSGMLSDFS GYVGGALKPI  720
TNQLSARSNG LLTAATGGFQ AAVTDDVSSC STSLSTNNCR NAVQTVINGR NHQSTTLGDE  780
IAQSSASLLN PSGLEQMSSN GHIGKDIHQK SDAKPSMNVF KNQNHGFIGA HTFHDRAGTQ  840
IDYLDSSSSV TSVFPQNEGQ IPQNNSMTYN SQSLFFRDAS QDGEVLGDPR SNVPFGTDID  900
NQLDMPLILN PLVTKDMGGS GKDFANNLSS GEGVLSTYEN PKDAQPVHSS SMVSQPFGVP  960
DVAFNSIDSN VDDGGFVNRG SWAAPHIPRM RTYTKVYKRG AVGRSIDISH YSGYDELKQD  1020
LARRFGIEGQ LEDRQRIGWK LVYVDHENDV LLVGDDPWEE FVSCVRCIKI LSPQEVQQMS  1080
LDGDFGDNVL PNQVCSSSDN VV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein