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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | TEY66222.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 256aa MW: 28992.9 Da PI: 4.2758 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 60 | 3.9e-19 | 53 | 106 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k
TEY66222.1 53 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 106
566899***********************************************9 PP
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| 2 | HD-ZIP_I/II | 129.1 | 1.8e-41 | 52 | 144 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrls +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy Lk++yd+lk + er+++++e+L +e++e
TEY66222.1 52 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGGLKASYDNLKLNFERIQHDNESLLKEIRE 144
69**************************************************************************************99986 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 256 aa Download sequence |
MKRLSSSDDS LGGLMSICPN TTEMYDAREF ESMLEGLEGE EEAGPAAAAA AEKKRRLSVD 60 QVKALEKNFE VENKLEPERK VKLAQELGLQ PRQVAVWFQN RRARWKTKQL ERDYGGLKAS 120 YDNLKLNFER IQHDNESLLK EIRELKSKLG EDDAEKAEAE IEIGAAEAED RDLDGGGKEE 180 EARWPNSGDL KDGSSDSDSS AIVNEENNGS WMKTEAPPQL VKIEEYNFFG EESCSTLFSD 240 DQAPSLQWYC NEQWDR |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 53 | 82 | KKRRLSVDQVKALEKNFEVENKLEPERKVK |
| 2 | 101 | 109 | RRARWKTKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G22430.1 | 2e-51 | HD-ZIP family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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