PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY66515.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 242aa    MW: 27345.4 Da    PI: 9.8246
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY66515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF69.23.7e-221159351
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                ien + rq t++kR++gi+KKA EL vLCd++va+i+f+++g+l  ++s
  TEY66515.1 11 IENPTSRQLTYTKRKEGIIKKAGELAVLCDTDVALIMFAPSGRLASFAS 59
                9*******************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGRKKLSMRL IENPTSRQLT YTKRKEGIIK KAGELAVLCD TDVALIMFAP SGRLASFASN  60
RRFSSLFIYL LFNFFYVNCK KKNAKNGVRI EDILLRFVDR PDELRGGPIN HEEELEGKLD  120
KLTRKQRESK EKMRYYEPNV KKINSALEAG VYQQFLTTAI QRIQTSKAKL LGNQLGHERT  180
ENVEVQAATM RMDDAVSLTG HSAEGNHAWM RLNMDENQSG SSSAAGCGIS HGIYEALRFG  240
CC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.12e-24MIKC_MADS family protein