PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY66549.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 918aa    MW: 101958 Da    PI: 6.7756
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY66549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.51.2e-23144244198
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++p++ ae+       ++ ++++ +l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD v+F   ++++ +l+
  TEY66549.1 144 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfSLTPPCQ-ELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFI--WNENNQLL 239
                 99*****************************98888886.9************************************************..78888889 PP

                 EEEE- CS
          B3  94 vkvfr 98 
                 ++++ 
  TEY66549.1 240 LGIRH 244
                 99886 PP
2Auxin_resp116.72e-38270353183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+++YnPras++eFv+++ k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++gvsd+dpvrWpnS+Wrs+k
  TEY66549.1 270 AAHAAATNSRFTIFYNPRASPTEFVISLVKYAKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGVSDIDPVRWPNSHWRSVK 353
                 79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 918 aa     Download sequence    
MKRKSRLRFV RNMRLSSSPT STGFNAQTEE GETKCLNSEL WHACAGPLVS LPLIGSRVVY  60
FPQGHSEQVA ASTNKEVDSA IPSYPGLQPQ LICQLHNVTM HADIETDEVY AQMTLQPLTT  120
QEQKDLCLLP AELGTPNKQP TNYFCKTLTA SDTSTHGGFS VPRRAAEKVF PPLDFSLTPP  180
CQELIAKDLH GNEWKFRHIF RGQPKRHLLT TGWSVFVSAK RLVAGDAVIF IWNENNQLLL  240
GIRHAQRPQT VMPSSVLSSD SMHIGLLAAA AHAAATNSRF TIFYNPRASP TEFVISLVKY  300
AKAVYHTRVS VGMRFRMLFE TEESSVRRYM GTITGVSDID PVRWPNSHWR SVKVGWDEST  360
AGERQPRVSL WEIEPLMTFP MYPSPFSLRL KRPWPSALPS FPGVGDGDMS LNSPLTWLRG  420
GGGIGDRGMQ SLNFQRFGMS PFMQQPRLDN SMLGLQPDMY HSMASNSFQD ALSLDPSKVS  480
NQLLLQLQQN VSASPIQNQM LQQSNPQQTF VQNFPENVMS QAQMLHQQLE LHQQFKDQQE  540
QQLQQHEQRV QQSQQMHQHL QDQQNKTTIQ NGPRMGQASQ HQLSPLQAMA STSQLHNFSD  600
LIGNHVSSSN ASSMPQSLLT SFSNEGMVNW HGPNNTLVSH SSSSKRVALD PQLPPKVSQF  660
GMLHPDELVT PGPKLPDLSA LLPPFPEREF LGLQGASDSH NRSPFGVTTD SSSAMMLNGL  720
SSSFSNTGNE NGSFSMPYAT PAFVSAAGTD FPRNSEMTSS SCVDESGYLQ ASENADQTNP  780
PPGTFVKVHK TGSFGRSLDI SKFSSYNELR SELAQLFGLE GLLDDRQRSG WQLVFVDREN  840
DILLLGDDPW QEFVNSVSCI KILSPNEVQH MGKEGLDLPN PPQSQVVPNN GSSCDDRTSH  900
KESRGSFNRI PSVGLFDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein