PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY66560.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 407aa MW: 44601.7 Da PI: 5.3319

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY66560.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.3	1.2e-06	5	44	6	39
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ ++e++ + +C+++ lC +C + H+ H++ TEY66560.1 5 CDFCGEQRSIVYCRSDAASLCLSCDRNVHSAnalskrHSR 44 *****************************65667777765 PP
2	zf-B_box	23.9	8.5e-08	46	77	4	35
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 +C+++++++++ C + ++ lC++C ++H+ TEY66560.1 46 LVCERCNSQPASVRCMEERVSLCHNCDWTGHS 77 68*****************************6 PP
3	CCT	60.3	6.2e-21	350	392	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R a++RYkeK+ktRkFeKk+rYe+RKa+A+ R RvKGrF k+ TEY66560.1 350 RSDAVMRYKEKKKTRKFEKKVRYETRKARADVRRRVKGRFIKA 392 889*************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MGYLCDFCGE QRSIVYCRSD AASLCLSCDR NVHSANALSK RHSRTLVCER CNSQPASVRC 60 MEERVSLCHN CDWTGHSSSS TSSANKKQSV NCYSGCPSSA ELSHIWSFLL DDPSAEGSAC 120 KQGLDSMSIT DIKQRDCQDN YSSKGVVTLP SEASNLSNVG MDKEADWMEL SASMQNAGLL 180 AGSTHSAMRK VYVPREEGIA ECKDTEFYDN FNVDEIDLGI ENYDELFGAA LDNPDRLFDN 240 EDIDGLFGPH DMSFSDCQAA YPAEGSSVGG FKMPPACSNA ASADSVVSCK TEPNICFMRQ 300 AHSGLSFSRL TGESSGVDYQ DCGASPMLNM GDPPWGLPGP ESAIPPSSSR SDAVMRYKEK 360 KKTRKFEKKV RYETRKARAD VRRRVKGRFI KAGDAYDYDP LCKSRSC

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MGYLCDFCGE QRSIVYCRSD AASLCLSCDR NVHSANALSK RHSRTLVCER CNSQPASVRC  60
MEERVSLCHN CDWTGHSSSS TSSANKKQSV NCYSGCPSSA ELSHIWSFLL DDPSAEGSAC  120
KQGLDSMSIT DIKQRDCQDN YSSKGVVTLP SEASNLSNVG MDKEADWMEL SASMQNAGLL  180
AGSTHSAMRK VYVPREEGIA ECKDTEFYDN FNVDEIDLGI ENYDELFGAA LDNPDRLFDN  240
EDIDGLFGPH DMSFSDCQAA YPAEGSSVGG FKMPPACSNA ASADSVVSCK TEPNICFMRQ  300
AHSGLSFSRL TGESSGVDYQ DCGASPMLNM GDPPWGLPGP ESAIPPSSSR SDAVMRYKEK  360
KKTRKFEKKV RYETRKARAD VRRRVKGRFI KAGDAYDYDP LCKSRSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	1e-108	CO-like family protein