PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY67750.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRAS

Protein Properties

Length: 366aa MW: 40460.9 Da PI: 6.4209

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY67750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	193.8	1.1e-59	131	366	1	233
GRAS 1 lvelLlecAeavssgdle..........laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 l++lL++cAe vs+ d+ +a+al++ l++++s +g+p qRl e+L+arl++s+s +yk+l+++e + sse + ++ ++++++P TEY67750.1 131 LIQLLVACAEIVSEADTIsmsdrqvaisAAEALMEILEKNVSVSGEPAQRL-----EGLRARLLSSGSIIYKKLKCKEPT---SSELMPYMGVLYQICP 221 6899****999966533334446666999***************7.....9******************9...999999****** PP GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186 ++kf+++ N I ea+e+e+r+HiiDf+i qG W++L+qaL+ Rp+g p +RiTgv++++s + l +g++Lak+Ae++gv fefn +a + TEY67750.1 222 YYKFAYMSSNVIIGEAMENENRIHIIDFQIAQGSRWISLIQALSRRPGGLPYIRITGVDDSQSAhaRGGGLALVGQKLAKVAESCGVVFEFNG-AAMSG 319 ********************************************************9988889999*******************.89999 PP GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvks 233 ++le+Lrv++gEalaVn+ + lh+++desvs++++rd+ L+l+ks TEY67750.1 320 CHVQLEHLRVRHGEALAVNFPYILHHMPDESVSTANHRDRRLRLIKS 366 9******************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MQTSRTSNSF QSFYIQPMQQ IDPYSSSTFQ ILNNDSTGSR SQGTEVSFQS SPDQFFTLES 60 TPATDYATYR SPSALSVSSI AACLVLWVLR NELRVPESDT DDSGTFNGVV TQPSPFTRYN 120 KILEMAPHMD LIQLLVACAE IVSEADTISM SDRQVAISAA EALMEILEKN VSVSGEPAQR 180 LEGLRARLLS SGSIIYKKLK CKEPTSSELM PYMGVLYQIC PYYKFAYMSS NVIIGEAMEN 240 ENRIHIIDFQ IAQGSRWISL IQALSRRPGG LPYIRITGVD DSQSAHARGG GLALVGQKLA 300 KVAESCGVVF EFNGAAMSGC HVQLEHLRVR HGEALAVNFP YILHHMPDES VSTANHRDRR 360 LRLIKS

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MQTSRTSNSF QSFYIQPMQQ IDPYSSSTFQ ILNNDSTGSR SQGTEVSFQS SPDQFFTLES  60
TPATDYATYR SPSALSVSSI AACLVLWVLR NELRVPESDT DDSGTFNGVV TQPSPFTRYN  120
KILEMAPHMD LIQLLVACAE IVSEADTISM SDRQVAISAA EALMEILEKN VSVSGEPAQR  180
LEGLRARLLS SGSIIYKKLK CKEPTSSELM PYMGVLYQIC PYYKFAYMSS NVIIGEAMEN  240
ENRIHIIDFQ IAQGSRWISL IQALSRRPGG LPYIRITGVD DSQSAHARGG GLALVGQKLA  300
KVAESCGVVF EFNGAAMSGC HVQLEHLRVR HGEALAVNFP YILHHMPDES VSTANHRDRR  360
LRLIKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17230.1	1e-101	GRAS family protein